FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494389
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCATAC3150.00650224213.8062641
CAAGTTC6456.669997E-410.0433083
GATCTCC5800.00313102579.9278675
CTCCACC7652.8201952E-49.4748871
ATTTCGG6200.0054303819.287366
CCGGCTT6250.00580142629.2130619
CTTTTTT17456.958995E-45.8152461
Produced by FastQC (version 0.11.5)