FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014189

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014189
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2209469
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA9600.00276940787.5289396
CTTTAAG20451.4279727E-45.6832831
AATTTCG18850.00192984995.36811355
CAATCGT18000.0061948175.24618341
GTTCGAT18050.00639937545.2316521
Produced by FastQC (version 0.11.5)