FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1406731
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGAT13753.460393E-57.3276831
CGATCAT11550.00228164746.8541251
CTAAAAT12150.00388242686.515651
CTTCGAC12200.0040527536.48894641
CATAAAC12750.00641581146.2090311
TCCGGAC12950.0078664826.0881412
CCCGGAT18955.4237007E-56.07648041
CTTTTAT26353.90278E-55.1893661
Produced by FastQC (version 0.11.5)