FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1344436
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGGAG7955.017081E-48.9477339
CCTTAAT9854.5285182E-47.97926661
CTTCGAC11502.8822062E-47.45572571
CCCGCAT10700.0088841536.67763661
GTTTGAA14757.0312736E-46.2973511
CTCAAAA18253.4809316E-56.2641721
CAAGGAC15200.00101038696.11091571
AGATTTA15750.0016322175.87141754
CTTCTAT17550.00558132725.2926451
Produced by FastQC (version 0.11.5)