FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences824492
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGCC3150.007130894313.6166681
CGAGGAG4756.267714E-412.0400011
GTTTAAA7900.00450087158.1441461
CTTTCAT16259.2579285E-87.91861631
ACATTCA10650.0088418566.68028074
CTCCTGC14003.702159E-46.63812541
Produced by FastQC (version 0.11.5)