FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014202

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014202
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences484268
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATAAC3150.00650284613.8059871
CTATATT5650.00237756410.26285651
CTCAAAA6350.0062408499.1315181
CCCCCCC1300.0080177618.85958345-49
AGAATAC6650.0096948098.653845
CCTTTCT9150.00167507357.92146731
CTTTTTT18452.2208292E-45.89279941
CTTTCTT16800.0028035715.6086821
Produced by FastQC (version 0.11.5)