FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1293235
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT4703.3815697E-513.8394939
CCCGATT8100.0050912878.0340512
CTTCGGT12154.50753E-47.1710591
GGTAAAT12000.00310697626.65563871
TCAAATT17055.361816E-45.93718672
CCAAAAT15500.00699277185.62118531
GTTTTTT31751.6583908E-75.48840141
ATTTAAT20609.6571416E-45.2869161
Produced by FastQC (version 0.11.5)