FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences972780
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACGTCT4750.00994662310.3239143
CTCAAAC6407.619239E-49.90086651
CCTGAAC10650.0097811266.61090761
CTGATTT15300.00130358855.9822231
CCTGCAT17250.00541418055.30597161
CAAAGAA19350.0037120815.0939861
CATCAAG18150.0098083195.04286581
Produced by FastQC (version 0.11.5)