FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences930812
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTAGT1800.004622915319.8939386
CCCAAAT6750.00102540999.5851331
CTTAAAG6450.0076010618.9164021
CTTTGAG9150.00182014447.8566661
CCCTGCT12406.369656E-46.9569511
CTCCAGC10750.0087551496.68730161
CGCTTTC13750.00214290786.25031384
CTTCAAT14800.0046755315.8287971
Produced by FastQC (version 0.11.5)