FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences798820
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAATCTA2950.0043762314.6570944
GTCAGCG5300.001412539510.92684651
ACCAAAT5950.00383925869.6874657
CTGAATT7150.00162733959.1120721
CCCGAAA7500.00251251278.6868421
GTTCAAG8300.006266957.84955641
CTCAAAA12300.0041465626.47393371
CAAAGAA19507.526364E-55.9397211
Produced by FastQC (version 0.11.5)