FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences597005
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTACTT3250.00904539113.1346321
GTAAACG4450.00560432711.152112
CTTAAAT4550.00644090310.9455271
CCTGTAT6400.0077580778.8932411
CTTTTGT9503.2050308E-48.2379491
TTCCAAT8150.0064357687.82567939
AAAATCT12306.820416E-46.9143233
TTTGATG10500.0079689486.75195842
CAAAAAT14104.273289E-46.55955361
CAAAAAG14400.0038626125.9288271
Produced by FastQC (version 0.11.5)