FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1310493
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAC12155.7072182E-57.7270771
CCTGGAG8650.0092717.51405861
CTTCAAC19259.501344E-66.3777331
CAGATTC16905.0550717E-45.96455673
GTGAAAA16650.0026426115.63867761
CAAGGAT17850.00600630325.2596071
CTTTATT20850.00121846565.19557241
Produced by FastQC (version 0.11.5)