FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences658164
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCATTT6850.00111094429.5007141
GGCTGAT7850.00383150798.2904321
TTCAACA8700.0098816117.4594122
AAATACT10450.006465526.89972976
CCCCCAA2350.00269175676.747939690-94
Produced by FastQC (version 0.11.5)