FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1309111
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGACC2500.001450233317.2970393
CTGATAT18950.00201115155.35005141
TTCACCT17850.00616020435.24826677
CTCAAAA18050.0066271865.2156121
Produced by FastQC (version 0.11.5)