FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences812584
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTAGA1600.00235223722.3524761
GACGTTG4750.00876077610.5020345
TGTCTTA5650.002742742210.0892089
CTCAGGA7150.0018150369.0035141
TCAGATT11500.0023788276.82619952
AAAATCT18400.00169600165.4222463
Produced by FastQC (version 0.11.5)