FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1144150
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAGA2700.002363626116.0782811
CCAATAA11251.9342161E-47.7175751
AGAATCC13100.00114204086.6091515
CTTTTAA13400.0014294746.47930771
CAATCTT12850.00658137036.19357871
ATTCTGG15600.00122762476.01249176
CTTCCGC21503.085459E-45.38435461
Produced by FastQC (version 0.11.5)