FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1328533
Sequences flagged as poor quality0
Sequence length100-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACAT6650.00905545158.7283461
CTTTGAT22705.795846E-86.7120791
CCTTTAT21306.4165342E-66.1313561
CCTTCAT17851.4019982E-46.0970061
CATGGAT13250.0087855196.0233821
AAACTCT15700.00130559675.98190935
CTGCCAG15550.00730441655.59905151
Produced by FastQC (version 0.11.5)