FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4061652
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTACTT15451.4763961E-46.56163361
CTCAACT19105.574758E-56.06595231
CTCAAAT34006.002665E-105.9633671
CTCAGAT24501.6758513E-65.91120961
CTCAGCA29453.6436177E-85.9011731
CTCAAAA54700.05.42761371
CCCAAAT23401.7924883E-45.26072361
CTCACAT19600.00307723865.1723081
CCCACAC23058.1760675E-45.0264511
CTCGATT23108.4283244E-45.01557161
Produced by FastQC (version 0.11.5)