FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences609459
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGAGA3558.7011454E-414.2917021
CCCAAAT4252.1804076E-413.6431711
CCAGACT3900.001836009812.9450768
TAACATT6709.288525E-49.6881074
ACTTTGC7450.0024437688.7127935
CCTGCAT9600.00268804687.5499321
TCAATAT15050.0054228275.75063663
Produced by FastQC (version 0.11.5)