FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1888783
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGTGG14103.5335077E-46.6648241
CTCTTAT13300.0013280616.52219961
CTTCACA15309.510132E-46.1420931
CAAATCG15850.00149081275.9164023
CTCCAGA17608.078167E-45.75015931
CTTTAAT25403.269408E-65.69194561
CCACAAT15550.00761184335.57847261
CTTCAGG22107.770488E-55.5605931
CTTTGAT25652.3219403E-55.35464531
CTTTAAA26854.954336E-55.11533161
CTTGAAA34601.0731292E-65.0141761
Produced by FastQC (version 0.11.5)