FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences643326
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAA4500.005177188711.2716361
CTTTGAT9402.3470259E-48.4794221
GGGTAGG1600.004579248.130004100-104
CTTCATT10759.905499E-47.4145641
CTTCAAG10650.00740296076.8038041
CTTTTGA10850.008859756.6783881
CTTCTTT18353.0587835E-56.3180831
Produced by FastQC (version 0.11.5)