FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1515053
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCGAT12700.00115248576.6041991
CGAAACC13750.00290738126.0831693
CCCATCA14950.00111384386.06172857
CCCGCAT14050.00358843695.9696321
GTAGAAA14600.0054995265.74474861
CACCGAA15400.0099059825.44632051
Produced by FastQC (version 0.11.5)