FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516773
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCCCC1705.014298E-429.130241145
AAGGACC1650.00309907821.3136882
TTCAGTC2900.00458736514.5521062
AAATAGG4750.009695410.3581616
AGTAGTC1650.00422683368.202441115-119
GACCCGA2300.0070360026.84131125-129
Produced by FastQC (version 0.11.5)