FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014286

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014286
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500275
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGTATC3850.001730901513.0461419
CCAAGGA4350.004323126711.5465858
TCGAAGA5500.002062563810.4400432
CCACCAT6050.00440882949.5252321
CTTCAGC6450.00746547068.934521
CAAAAAT10850.0093692156.63913061
Produced by FastQC (version 0.11.5)