FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014306

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014306
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4090980
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGACT10450.0062224556.9289631
CCCGAAT22804.6288733E-76.35154871
CTTTGAT62200.05.5877291
CTTAGAA16950.00317121325.55338951
GTTTCGA22851.2557064E-45.3870031
CTCAAAT33651.0421718E-75.37946941
CTACGAA20207.723513E-45.37680631
CCCAGAT35603.485493E-75.08480741
CCCACGG27507.1595525E-55.0027111
Produced by FastQC (version 0.11.5)