FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427571
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATCAT4000.002012479412.7865571
CTCCATT5150.001026423111.3500651
CTATAAT5400.001525234410.8245981
GATTTAA4900.00988449710.3305115
CTCCTTT9652.6775688E-69.8430941
CTCTTCT6500.00707434028.99274351
Produced by FastQC (version 0.11.5)