FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014320

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014320
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1580086
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGGA5900.00345401639.8132481
GTAGATA12250.0041216296.47861342
AATTTAC16252.9838822E-46.214275
CTCAAAA21105.737922E-66.17397451
CTCAAAG15259.0107403E-46.1694761
ATTTACC18950.00211505135.328866
GCCATTT21100.00144708035.12901833
CAATAAA29759.269568E-65.10866071
Produced by FastQC (version 0.11.5)