FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences919010
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2951.0282851E-519.495937
ACACGTC3703.6826987E-617.4870598
CACGTCT4151.0965679E-515.590879
GTTTGAT10053.4997356E-911.4753411
AGCACAC6104.040375E-410.6069055
GAGCACA6154.3566123E-410.5206694
AGAGCAC5700.002741543810.0899983
GCACACG5850.00339966069.831286
ATCGATC5900.00363938379.7506172
CATTGGA8609.6095476E-48.3813341
CTTTCAT14454.9233023E-46.4846591
GTTCCAG12750.00630809936.21862171
TTTGATT14800.0046593115.83060552
CTGAAAA21300.0083267735.531907145
Produced by FastQC (version 0.11.5)