FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences748915
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCAC9502.7479371E-59.11971951
CTTTATG7500.0025735328.66373351
AAACAAC8100.0053771677.9844845
CAACAAA9650.00294012957.48163561
CGGAAGA12850.0067214976.1803551
CTTCCGG14700.00413081665.89369631
Produced by FastQC (version 0.11.5)