FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences607059
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTTGC7300.00217769838.8241565
CTTCAAT8850.00120936178.1879521
ATTTTAA11653.271452E-47.3723995
TTGTATT10250.00575578456.98280052
ATTCTTT14900.00460449335.8359771
TTCTTTA14850.0050883135.7837342
Produced by FastQC (version 0.11.5)