FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946942
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGCG7750.00356023488.3589211
CACCAAT8000.0047399898.0977041
CTAAAAT8100.0053002347.9977321
GTTTGAT10350.00599391156.954551
CAGGATT10350.00620036346.93030263
CAACAAC15501.6594259E-46.5013831
CAAAAAT20301.4604206E-45.67326831
CTTTTAT17350.00446835.3932841
CTTGAAA17400.00462229135.3777851
Produced by FastQC (version 0.11.5)