FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences879917
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAAA10950.0089357576.6730561
CTTCGAT11050.0097537866.61266661
CTTCCAT15751.6798095E-46.49510771
CTTTTAT17157.322036E-56.39095931
GAAAGAT16050.00956291155.46317531
Produced by FastQC (version 0.11.5)