FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences904606
Sequences flagged as poor quality0
Sequence length100-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCTTG8357.561327E-59.4115496
CCATCCT8307.011863E-48.6514891
ATCGGAG7450.00266559458.6306036
CTTTGAT9750.00343067257.36485771
CTCGAAG14700.00439050145.86182551
Produced by FastQC (version 0.11.5)