FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences969267
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCATGAG4750.00983535217.451319145
CTAAAAA4050.004970376411.3344011
GATTTTA10552.9496884E-47.4402095
ATTTTCG11150.004290326.45318566
CAAAAAT14850.00213287355.74080041
TTTTCGG16600.0081706545.12261347
Produced by FastQC (version 0.11.5)