FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences614796
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAATAGT2750.002672146815.7836661
CGCTCGT4650.006688732710.8901641
CTCCAAT4700.00724196610.7743111
GTTCAGG6050.004259019.5658591
ACATTTC6600.0090586548.7266234
ACGATAT7450.0024725268.7015853
CTGAAAT8659.806338E-48.36321451
Produced by FastQC (version 0.11.5)