FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences901040
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTAGA400.005922668654.6696931
ACACGAG1650.002669838521.8705738
GTAGTAC2600.001858172616.6673072
GATACAC6809.661311E-49.6475931
AACCAAT6650.0094496758.6824539
AAGAATT17950.00104700685.63314722
TGATATA15550.007672945.5736334
Produced by FastQC (version 0.11.5)