FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1401858
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAACCG8350.00657313367.80873161
CTCGAAA8600.0085585997.5817331
GTCCGTC12305.3204474E-47.0680661
GTTTAAA12150.00362187466.5590491
CTTAATT12200.00378093036.53216741
CGAATTT12400.00469689356.3979193
CTTGCAT13800.00196308256.29979751
CTTCAAT21200.00145789035.12601471
Produced by FastQC (version 0.11.5)