FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014371

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014371
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1000919
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGGT8950.00137255498.0849351
CTTTCGA9200.00180100387.86523531
CGAAATA10600.0075115346.7943764
CAATCCG13950.00224520156.22453071
CTTTCCT15050.005237795.76958131
CTTTCAT20057.0286676E-45.41347841
CTTCCTG17850.0058655195.2699281
TTTGATT18050.0070204255.1896562
Produced by FastQC (version 0.11.5)