FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1714740
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACCCT4650.00670666210.8880611
AGTAGGT9201.9579024E-48.6246937
CCCAAGT8659.847677E-48.3615991
CCCGGAT16355.751057E-67.07795241
GAAGGGA14505.0961046E-46.46716834
CTTTTGG18453.4180688E-56.27233271
CTGGAAT20552.5443807E-55.98332451
GTGGCAT16050.00167720375.8583291
CTTCGCT16250.00194444395.78622631
CCCAATA15500.0073003035.5995741
Produced by FastQC (version 0.11.5)