FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1013320
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGGT3808.3936524E-515.2658851
TTTTACC14055.322192E-67.7072177
GTCCCGG8600.0084859497.5885661
CAAGTTC11150.00152099837.12197549
CTTTGAA16600.0024277645.6787261
CAGGCGG18950.0063627415.6687975145
Produced by FastQC (version 0.11.5)