FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014421

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014421
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90011677
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG523350.06.650566145
GATCGGA486150.06.3689404145
ATCGGAA507100.06.06292145
CGTCTGA340300.05.540143145
ACACGTC364800.05.4861016145
TCGGAAG524800.05.195216145
CGGAAGA553250.05.111552145
TAGATCG207300.05.043336140-144
Produced by FastQC (version 0.11.5)