FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62585648
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC352800.08.7747689
CGCCGTA90600.08.03399455-59
AGAGCGT395350.07.9770728
GATCGGA416850.07.59061961
ATCGGAA438050.07.31559232
TCGGAAG452850.07.12382943
TCGCCGT111350.06.719167755-59
AAGAGCG475750.06.7051717
CGGAAGA482350.06.7035054
GCCGTAT122900.06.241080855-59
GTCGCCG125550.05.8899255-59
TGGTCGC143000.05.42441450-54
CGTATCA150100.05.17771860-64
Produced by FastQC (version 0.11.5)