FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65980794
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA243350.07.2298721
TATGCCG89100.07.030593445-49
ATCGGAA271750.06.80309772
TCGGAAG286500.06.52876663
CGGAAGA311350.06.1240774
CTCGTAT107700.05.897093340-44
AGATCGG258300.05.6702323145
TCTCGTA109000.05.361152640-44
CGTATGC106100.05.07042645-49
ATGCCGT129650.05.03298845-49
Produced by FastQC (version 0.11.5)