FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014492

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014492
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66761179
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC315400.07.9299329
GATCGGA358000.07.08588031
AGAGCGT355550.07.05485068
ATCGGAA378900.06.65871572
TCGGAAG396750.06.3403883
CGCCGTA82600.06.30164955-59
GCGTCGG51450.06.05867145
CGGAAGA427900.05.98047544
AAGAGCG436600.05.8782087
TCGCCGT96900.05.506350555-59
Produced by FastQC (version 0.11.5)