FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42975957
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA341450.016.7080141
ATCGGAA351150.016.3737142
TCGGAAG358200.016.030783
CGGAAGA374000.015.3139894
TATGCCG92450.013.69158345-49
CTCGTAT107150.011.62387940-44
TCTCGTA107100.011.2908540-44
CGTATGC108350.011.13373345-49
ATGCCGT115150.010.77844645-49
TCGTATG115100.010.039945-49
AGAGCAC594350.09.8921278
GCCGTCT122850.09.87867750-54
TGCCGTC121750.09.46774750-54
GAGCACA637850.09.3879899
GAAGAGC659950.09.2163626
ATCTCGT134100.08.86615240-44
CGTCTTC151600.08.59822850-54
CCGTCTT154850.08.10877350-54
AAGAGCA879900.07.0608767
GGAAGAG1023700.06.2389915
Produced by FastQC (version 0.11.5)