FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98046849
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC492900.010.340059
GATCGGA544650.09.456191
AGAGCGT561400.09.1424738
ATCGGAA575100.08.9771822
TCGGAAG609950.08.4862863
CGCCGTA138800.08.03297155-59
CGGAAGA652200.07.96984964
AAGAGCG661850.07.9301597
TCGCCGT163300.06.907688655-59
GCCGTAT185250.06.253568655-59
GTCGCCG200850.05.6090455-59
CCGTATC216850.05.175180460-64
CGTATCA234400.05.121730360-64
TGGTCGC226450.05.103152350-54
Produced by FastQC (version 0.11.5)