FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014563

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014563
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64623673
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG102700.06.070799445-49
ACCGCGC210950.05.38988831
GATCGGA371450.05.31745241
AGATCGG390800.05.288522145
CTCGTAT120550.05.244165440-44
CGCGATC147900.05.19602353
ATCGGAA393350.05.14341972
TCGGAAG410850.05.118689145
CGTATGC124550.05.087279345-49
Produced by FastQC (version 0.11.5)