FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104540404
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG347800.07.7751659
CGCCGTA161050.06.905326455-59
GAGCGTC432850.06.33122068
TCGCCGT183850.06.088401355-59
GATCGGA446650.05.93493841
AGAGCGT504700.05.60222347
ATCGGAA508600.05.5031182
GCCGTAT212050.05.42231255-59
TCGGAAG542000.05.2175092
GTCGCCG214700.05.11901955-59
Produced by FastQC (version 0.11.5)