FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56553977
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA76550.07.368240455-59
TCGCCGT89950.06.39953955-59
GAGCGTC332650.06.385539
GCGTCGG46750.06.047871145
GCCGTAT102950.05.929459655-59
AGAGCGT391150.05.5231878
GTCGCCG111650.05.363529755-59
GATCGGA397100.05.31757451
GTCGCGT26503.8150043E-55.197892145
ATCGGAA417550.05.12284762
TCGGAAG424700.05.0357473
Produced by FastQC (version 0.11.5)