FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014639

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014639
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79282437
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA312000.07.90353061
TATGCCG101050.07.647442345-49
ATCGGAA346900.07.33715062
TCGGAAG364600.06.94116833
CGGAAGA396000.06.46269234
CTCGTAT125900.06.27605140-44
TCTCGTA125350.06.03756640-44
CGTATGC128050.05.93303745-49
ATGCCGT151100.05.17189445-49
AGATCGG328850.05.049117145
Produced by FastQC (version 0.11.5)